SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G276300

Alias WNK10

Description Not annotated

Gene interval Chr09:49161113–49166087 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G51630:WNK5:with no lysine (K) kinase 5

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features430Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0023.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

430 matching features · page 3 of 43

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P03801 Lapathoside D 634.1878 17.15e-14
P03812 Safflomin C 614.1655 13.278e-11
P03825 1,2-(dioctanoyl)-sn-glycero-3-phospho-(1'- myo-inositol-4',5'-bisphosphate) 746.2092 14.135e-11
P03886 Methyl 2,3-dihydro-3,5-dihydroxy-2-oxo-3-indoleacetic acid 237.0625 16.675e-12
P03971 Rhodolauradiol 350.0635 16.828e-11
P04012 N2,N5-Diacetylornithine 216.1093 16.372e-13
P04017 (+)-Notoamide A 463.2143 15.303e-11
P04243 Jioglutin D 246.1112 19.517e-15
P04521 6-Acetamido-3-oxohexanoate 187.0828 11.884e-12
P04560 17-dimethylarsinoyl-9Z-heptadecenoic acid 388.1968 11.033e-11