P04243
Metabolite ID
P04243
Deionized mass
246.1112 Da
Average m/z
247.1168
Average RT
8.0432
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
90
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
Loading GWAS records…
Loading Manhattan plot…
This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
Loading Q–Q plot…
Loading GWAS summary…
Associated genes
90 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G196800 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 4 | Chr16:35831912–35835153 (+) | 7.455e-13 | |
| Glyma.03G021400 | hypothetical protein | AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein | 2 | Chr03:2202325–2234931 (+) | 7.144e-11 | |
| Glyma.08G117400 | hypothetical protein | AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein | 2 | Chr08:9054060–9063297 (+) | 1.843e-12 | |
| Glyma.08G117500 | hypothetical protein | AT4G18780:IRX1:cellulose synthase family protein | 2 | Chr08:9065033–9071774 (-) | 1.829e-14 | |
| Glyma.08G117700 | hypothetical protein | NA | 2 | Chr08:9080318–9084658 (-) | 5.455e-14 | |
| Glyma.08G119300 | hypothetical protein | AT1G29330:ERD2:ER lumen protein retaining receptor family protein | 2 | Chr08:9198213–9201688 (-) | 2.416e-15 | |
| Glyma.09G274700 | hypothetical protein | NA | 2 | Chr09:49057465–49065986 (-) | 4.54e-14 | |
| Glyma.09G275800 | hypothetical protein | NA | 2 | Chr09:49116424–49122191 (-) | 4.54e-14 | |
| Glyma.09G276100 | hypothetical protein | AT2G38510:AT2G38510:MATE efflux family protein | 2 | Chr09:49139110–49143810 (-) | 4.54e-14 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 9.868e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 1.425e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 1.425e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 8.736e-12 | |
| Glyma.19G029600 | hypothetical protein | NA | 2 | Chr19:3681517–3690884 (-) | 3.658e-11 | |
| Glyma.01G010400 | SLTI248 | DEAD-box RNA helicase | AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein | 1 | Chr01:1009200–1013846 (+) | 1.639e-11 |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 1.205e-11 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 1.205e-11 | |
| Glyma.02G031400 | hypothetical protein | NA | 1 | Chr02:2899554–2901708 (+) | 3.687e-11 | |
| Glyma.02G081600 | hypothetical protein | NA | 1 | Chr02:7054190–7055955 (-) | 1.347e-11 | |
| Glyma.02G081900 | hypothetical protein | AT1G43650:UMAMIT22:nodulin MtN21 /EamA-like transporter family protein | 1 | Chr02:7075646–7080163 (-) | 1.687e-12 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 9.445e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 1.384e-13 | |
| Glyma.03G124500 | hypothetical protein | NA | 1 | Chr03:33758928–33762195 (+) | 7.79e-12 | |
| Glyma.03G242800 | hypothetical protein | AT4G08630:AT4G08630:fas-binding factor-like protein | 1 | Chr03:44064511–44073939 (+) | 8.801e-12 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 2.147e-12 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 2.942e-12 | |
| Glyma.05G233500 | hypothetical protein | NA | 1 | Chr05:41066769–41067350 (-) | 1.319e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.74e-13 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.793e-16 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 1.931e-13 | |
| Glyma.06G261900 | hypothetical protein | NA | 1 | Chr06:44875369–44879702 (-) | 3.387e-12 | |
| Glyma.06G305200 | hypothetical protein | AT3G21690:AT3G21690:MATE efflux family protein | 1 | Chr06:49420013–49426780 (-) | 1.022e-11 | |
| Glyma.06G313500 | hypothetical protein | NA | 1 | Chr06:50191600–50203098 (-) | 1.004e-13 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 1 | Chr06:50401945–50408153 (+) | 3.006e-13 | |
| Glyma.08G116400 | hypothetical protein | NA | 1 | Chr08:8947598–8949573 (-) | 5.193e-12 | |
| Glyma.08G116700 | hypothetical protein | NA | 1 | Chr08:8997512–9003565 (+) | 3.508e-11 | |
| Glyma.08G117100 | hypothetical protein | AT2G34190:AT2G34190:Xanthine/uracil permease family protein | 1 | Chr08:9032236–9036159 (+) | 1.97e-11 | |
| Glyma.08G118400 | hypothetical protein | AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr08:9147404–9153858 (-) | 1.829e-14 | |
| Glyma.08G118500 | hypothetical protein | NA | 1 | Chr08:9161382–9162471 (+) | 6.519e-15 | |
| Glyma.08G118600 | hypothetical protein | AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) | 1 | Chr08:9169843–9172229 (-) | 7.746e-12 | |
| Glyma.08G122000 | hypothetical protein | AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr08:9397717–9410004 (+) | 3.853e-11 | |
| Glyma.08G204800 | hypothetical protein | AT3G16140:PSAH-1:photosystem I subunit H-1 | 1 | Chr08:16601039–16602646 (+) | 1.315e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 3.014e-11 | |
| Glyma.09G274900 | hypothetical protein | AT5G02280:AT5G02280:SNARE-like superfamily protein | 1 | Chr09:49069946–49073277 (-) | 4.54e-14 | |
| Glyma.09G275100 | hypothetical protein | AT3G08760:ATSIK:Protein kinase superfamily protein | 1 | Chr09:49079101–49084269 (-) | 4.54e-14 | |
| Glyma.09G275300 | hypothetical protein | NA | 1 | Chr09:49094668–49096996 (-) | 4.54e-14 | |
| Glyma.09G275900 | hypothetical protein | AT5G01850:AT5G01850:Protein kinase superfamily protein | 1 | Chr09:49128687–49133154 (-) | 4.54e-14 | |
| Glyma.09G276000 | hypothetical protein | NA | 1 | Chr09:49131662–49132187 (+) | 4.54e-14 | |
| Glyma.09G276300 | WNK10 | AT3G51630:WNK5:with no lysine (K) kinase 5 | 1 | Chr09:49161113–49166087 (+) | 9.517e-15 | |
| Glyma.11G048300 | hypothetical protein | AT4G37640:ACA2:calcium ATPase 2 | 1 | Chr11:3601241–3607177 (+) | 8.267e-11 | |
| Glyma.12G049300 | hypothetical protein | NA | 1 | Chr12:3538428–3539170 (-) | 2.422e-12 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 6.009e-11 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 6.009e-11 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 8.208e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 8.208e-11 | |
| Glyma.12G183400 | hypothetical protein | NA | 1 | Chr12:34427496–34440319 (-) | 1.103e-11 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 9.868e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 3.738e-11 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 3.738e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.425e-11 | |
| Glyma.13G161900 | PAP25 | purple acid phosphatase | AT5G34850:PAP26:purple acid phosphatase 26 | 1 | Chr13:27748190–27752685 (-) | 3.725e-11 |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 1.785e-11 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 2.732e-11 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 1.785e-11 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 1.785e-11 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 2.537e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 8.936e-13 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 6.942e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 4.219e-11 | |
| Glyma.16G138900 | hypothetical protein | NA | 1 | Chr16:29620531–29621995 (+) | 5.902e-12 | |
| Glyma.16G139100 | hypothetical protein | NA | 1 | Chr16:29632332–29634248 (-) | 3.484e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 2.545e-12 | |
| Glyma.16G161500 | hypothetical protein | NA | 1 | Chr16:32076715–32092322 (-) | 1.858e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 2.341e-11 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 8.407e-11 | |
| Glyma.16G196900 | hypothetical protein | NA | 1 | Chr16:35841279–35846894 (-) | 7.323e-12 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 1 | Chr16:36806718–36809299 (+) | 7.012e-11 | |
| Glyma.16G209300 | hypothetical protein | NA | 1 | Chr16:36856833–36863994 (-) | 3.283e-11 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 4.656e-11 | |
| Glyma.18G262800 | hypothetical protein | NA | 1 | Chr18:54832649–54833890 (+) | 7.71e-11 | |
| Glyma.18G263900 | hypothetical protein | AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein | 1 | Chr18:54907058–54912936 (-) | 5.492e-11 | |
| Glyma.18G266100 | hypothetical protein | NA | 1 | Chr18:55052591–55056489 (-) | 1.971e-12 | |
| Glyma.19G009400 | hypothetical protein | AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein | 1 | Chr19:885045–893253 (+) | 4.198e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 1.325e-11 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 1.325e-11 | |
| Glyma.20G098400 | hypothetical protein | AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b | 1 | Chr20:34151918–34155417 (+) | 4.125e-11 | |
| Glyma.20G106900 | hypothetical protein | NA | 1 | Chr20:34962043–34967985 (+) | 9.218e-11 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr20:34984922–34988496 (+) | 6.17e-11 | |
| Glyma.20G108900 | hypothetical protein | AT4G24175:AT4G24175:kinesin-like protein | 1 | Chr20:35119868–35122488 (+) | 8.925e-11 | |
| Glyma.20G109800 | hypothetical protein | AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr20:35213258–35219502 (+) | 4.873e-12 |