SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G250000

Description hypothetical protein

Gene interval Chr09:47096937–47099390 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features443Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records21

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0474.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

443 matching features · page 42 of 45

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P48700 No candidate annotation 319.2442 15.274e-11
P48956 Ilginatinib 389.1764 13.75e-14
P49160 No candidate annotation 924.4051 15.182e-11
P49182 Noberastine 311.1785 15.109e-13
P49224 2-Amino-3-cyclohexylpropanoic acid 171.1235 12.42e-12
P49257 PIP(18:3(10,12,15)-OH(9)/16:2(9Z,12Z)) 924.4415 12.736e-11
P49348 Tirandamycin C 387.2085 12.758e-11
P49569 5-Ethyl-3-methyl-2E,4E,6E-nonatriene 164.1562 19.194e-11
P49591 3-O-(beta-D-glucopyranosyl)-2beta,3beta,14alpha,22R-tetrahydroxy-5beta-cholest-7-ene-6-one 610.3710 19.685e-11
P49826 No candidate annotation 321.2377 11.134e-11