Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P49569

Metabolite ID
P49569
Deionized mass
164.1562 Da
Average m/z
165.1629
Average RT
26.1735
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
40
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

40 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)1.958e-14
Glyma.16G072000 hypothetical protein AT1G52800:AT1G52800:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 3Chr16:7255773–7261809 (+)1.77e-11
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 2Chr08:9054060–9063297 (+)7.25e-14
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 2Chr09:46835469–46838091 (-)3.26e-13
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)7.609e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)9.331e-14
Glyma.18G106600 hypothetical protein NA 2Chr18:11947553–11951868 (+)3.806e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)3.778e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.005e-14
Glyma.05G169100 hypothetical protein NA 1Chr05:35959241–35961911 (+)7.185e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.806e-11
Glyma.08G116300 P34 NA 1Chr08:8935918–8938248 (-)4.731e-11
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)3.854e-13
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)1.262e-13
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)9.194e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.449e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)6.63e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)8.414e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.987e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)5.304e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)5.304e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)5.304e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)5.304e-13
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)3.437e-14
Glyma.11G070700 hypothetical protein NA 1Chr11:5282926–5287258 (+)3.247e-11
Glyma.11G105500 hypothetical protein AT2G16640:TOC132:multimeric translocon complex in the outer envelope membrane 132 1Chr11:8015639–8020644 (-)4.094e-12
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)1.27e-11
Glyma.14G132100 hypothetical protein NA 1Chr14:22626936–22629212 (+)6.508e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.545e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.828e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)3.599e-12
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.624e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)3.284e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)3.284e-12
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)9.772e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.017e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.017e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)4.871e-12
Glyma.19G247800 hypothetical protein NA 1Chr19:49385792–49388122 (-)4.452e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)5.14e-13