Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P49826

Metabolite ID
P49826
Deionized mass
321.2377 Da
Average m/z
322.2459
Average RT
26.4424
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)4.652e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)1.355e-11
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)5.809e-15
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.809e-15
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 2Chr09:46835469–46838091 (-)1.03e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.103e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)1.495e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)3.119e-11
Glyma.02G203800 hypothetical protein AT4G30935:WRKY32:WRKY DNA-binding protein 32 1Chr02:38920714–38930381 (+)2.484e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.109e-12
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)4.428e-15
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)3.187e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.849e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)5.809e-15
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.809e-15
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)9.96e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.809e-15
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)1.134e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)9.503e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)4.702e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)6.731e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.447e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.894e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.895e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.895e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.894e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.421e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.421e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.103e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.351e-13
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.351e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.351e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.099e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)7.053e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)7.87e-12
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)1.355e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)3.522e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)3.522e-13
Glyma.17G215200 hypothetical protein NA 1Chr17:36125880–36142936 (+)2.973e-11
Glyma.17G215400 hypothetical protein NA 1Chr17:36163614–36164915 (+)3.15e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.071e-13
Glyma.18G212700 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr18:49942123–49944169 (-)7.995e-11
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)1.703e-11
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)3.932e-12