Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P48700

Metabolite ID
P48700
Deionized mass
319.2442 Da
Average m/z
320.2519
Average RT
25.5224
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
57
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

57 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 3Chr16:35170253–35173950 (-)2.68e-12
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)5.101e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.565e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.565e-11
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)8.71e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.14e-14
Glyma.03G046000 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein 1Chr03:5848597–5849782 (-)5.851e-11
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)4.724e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.119e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.073e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.62e-12
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)9.555e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)9.555e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)4.771e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)7.189e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)2.393e-12
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)2.393e-12
Glyma.08G113400 hypothetical protein NA 1Chr08:8703339–8705594 (+)5.06e-11
Glyma.08G113600 hypothetical protein AT1G55320:AAE18:acyl-activating enzyme 18 1Chr08:8713767–8722379 (-)5.06e-11
Glyma.08G113900 hypothetical protein AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein 1Chr08:8730526–8734718 (-)9.233e-12
Glyma.08G114400 hypothetical protein AT4G25650:ACD1-LIKE:ACD1-like protein 1Chr08:8750828–8756629 (-)5.06e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.524e-15
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.691e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.955e-13
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)5.274e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)3.312e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)7.081e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.706e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)5.172e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)5.172e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)5.172e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)5.172e-11
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)1.093e-12
Glyma.14G135100 hypothetical protein AT4G31540:EXO70G1:exocyst subunit exo70 family protein G1 1Chr14:23623422–23626499 (-)4.17e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.25e-14
Glyma.15G037400 hypothetical protein AT5G59420:ORP3C:OSBP(oxysterol binding protein)-related protein 3C 1Chr15:2950291–2955686 (-)6.623e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.113e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.394e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.113e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.113e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.659e-14
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)7.268e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)7.268e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)8.527e-12
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)5.91e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)8.551e-12
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)7.598e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)8.134e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)2.379e-12
Glyma.16G189500 hypothetical protein NA 1Chr16:35202920–35206459 (-)1.357e-11
Glyma.17G118900 hypothetical protein NA 1Chr17:9401882–9402864 (+)4.151e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)4.553e-11
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)1.175e-13
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)8.279e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)9.115e-11
Glyma.19G222200 hypothetical protein NA 1Chr19:47439424–47441508 (+)3.483e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.329e-12