SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G060000

Description hypothetical protein

Gene interval Chr09:5548206–5554279 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features68Overlap
Maximum supporting SNP records7
Features with ≥2 supporting SNP records68

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4706.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

68 matching features · page 1 of 7

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P24346 2-[3-[1-[[2-(3,4-Dichlorophenyl)acetyl]-methylamino]-2-pyrrolidin-1-ylethyl]phenoxy]acetic acid 464.1223 76.276e-12
P05023 3,6-Dimethyl-1,4-dioxane-2,5-dione 144.0420 59.944e-11
P09068 threo-Syringoylglycerol 244.0933 54.354e-12
P11498 3,5-dimethoxy-4-(sulfooxy)benzoic acid 278.0091 52.713e-11
P17417 Abeado 349.1859 52.629e-11
P24756 Quercetin 3-(2'''-feruloylsophoroside) 802.1972 53.032e-11
P42197 4,5-Dihydro-4-((1-piperazinyl)acetyl)-7-(3-(trifluoromethyl)phenyl)pyrazolo(1,5-a)pyrimidine-3-carbonitrile 416.1541 56.287e-12
P43700 Dihydropicromycin 527.3418 53.195e-11
P48679 N-Docosahexaenoyl Threonine 429.2810 54.187e-11
P54673 Concentricol C 552.4106 54.552e-11