Overview Annotation GWAS Evidence Associated genes

P42197

Metabolite ID
P42197
Deionized mass
416.1541 Da
Average m/z
417.1589
Average RT
21.1965
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G060000 hypothetical protein NA 5Chr09:5548206–5554279 (-)6.287e-12
Glyma.09G060100 hypothetical protein AT5G57160:ATLIG4:DNA ligase IV 2Chr09:5561072–5570789 (+)6.287e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)5.388e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.015e-13
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.348e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.25e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.809e-12
Glyma.09G059700 hypothetical protein AT4G29940:PRHA:pathosis related homeodomain protein A 1Chr09:5513108–5520158 (+)6.287e-12
Glyma.09G059900 hypothetical protein AT4G26000:PEP:RNA-binding KH domain-containing protein 1Chr09:5540197–5546848 (+)6.287e-12
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)6.287e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)5.74e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.015e-13
Glyma.20G009700 hypothetical protein AT2G15820:OTP51:endonuclease 1Chr20:847971–851447 (+)2.051e-11