SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 153 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P53547 PA(i-12:0/5-iso PGF2VI) 662.3876 13.614e-12
P53552 Antibiotic KA 7367B 200.1542 16.74e-17
P53660 Tiegusanin E 650.2688 12.026e-13
P53694 Quivisianolide A 598.2373 12.496e-12
P53754 Garcinia lactone dibutyl ester 302.1368 12.966e-11
P53972 No candidate annotation 301.9107 12.614e-15
P54087 Ilicifolioside B 600.2606 11.869e-11
P54118 (2,7)-Decadienoylcarnitine 311.2060 12.03e-11
P54246 N-(2-hydroxy-docosanoyl)-4E,6E-hexadecasphingadienine 607.5476 11.603e-12
P54259 (5alpha)-27-norcholest-25en-2beta,3alpha,6alpha-triyl tris(hydrogen sulfate) 644.2000 11.734e-11