SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G100400

Description hypothetical protein

Gene interval Chr07:9523110–9526319 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G18050:AT3G18050:GPI-anchored protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features596Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records193

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4748.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

596 matching features · page 8 of 60

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01683 No candidate annotation 466.0571 21.292e-12
P02655 Monascorubramine 381.1976 21.31e-12
P02903 4-(4-(4-Fluorophenyl)-1-(piperidin-4-yl)-1H-imidazol-5-yl)-2-methoxypyrimidine 353.1640 27.643e-12
P03242 S-Adenosyl-L-homocysteine 384.1215 24.511e-12
P04032 Methyl 6-methyl-3-(2-methylpropyl)-4-(3-nitrophenyl)-4,7-dihydrothieno[2,3-b]pyridine-5-carboxylate 386.1272 27.225e-13
P04096 Rostratin A 428.1012 21.689e-11
P04137 Monomethyl phthalate 180.0435 21.135e-12
P04655 Methyl 6-methyl-3-(2-methylpropyl)-4-(3-nitrophenyl)-4,7-dihydrothieno[2,3-b]pyridine-5-carboxylate 386.1284 22.703e-13
P05425 Flucythrinate 451.1546 25.407e-12
P05841 Urate radical 167.0193 28.154e-15