Overview Annotation GWAS Evidence Associated genes

P04096

Metabolite ID
P04096
Deionized mass
428.1012 Da
Average m/z
429.1045
Average RT
7.9684
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 2Chr07:9523110–9526319 (+)1.689e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)7.052e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)7.052e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.714e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.926e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)8.845e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)8.666e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.052e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.052e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.409e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.45e-11
Glyma.16G040700 hypothetical protein AT3G03890:AT3G03890:FMN binding protein 1Chr16:3825551–3830340 (-)2.539e-12
Glyma.16G041000 hypothetical protein AT5G18140:AT5G18140:Chaperone DnaJ-domain superfamily protein 1Chr16:3852109–3856099 (+)2.539e-12
Glyma.16G041200 gdh1 AT3G03910:GDH3:glutamate dehydrogenase 3__AT5G18170:GDH1:glutamate dehydrogenase 1 1Chr16:3861427–3869280 (+)2.539e-12
Glyma.16G042100 hypothetical protein NA 1Chr16:3931670–3933390 (-)5.528e-11
Glyma.16G042200 hypothetical protein AT2G23840:AT2G23840:HNH endonuclease 1Chr16:3933842–3940818 (+)5.528e-11