SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G015700

Description hypothetical protein

Gene interval Chr07:1244977–1251198 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G79750:NADP-ME4:NADP-malic enzyme 4

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1774Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0028.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1774 matching features · page 111 of 178

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P31378 Caucasicoside B 914.4481 17.263e-11
P31391 No candidate annotation 297.0583 12.211e-11
P31398 Eutreptiellanone 562.3807 12.965e-14
P31493 Clocinizine 402.1832 18.782e-12
P31545 Wattoside H 688.3194 13.535e-11
P31577 No candidate annotation 968.3495 12.607e-11
P31611 9-(4-Hydroxyphenyl)-2-methoxy-1H-phenalen-1-one 302.0922 17.418e-13
P31635 Isocitral 152.1180 19.438e-13
P31644 8-(2,4-Dichlorophenyl)-N-(1,3-dimethoxypropan-2-yl)-2,7-dimethylpyrazolo[5,1-f][1,3,5]triazin-4-amine 409.1141 15.72e-12
P31672 C75 trans 254.1519 11.485e-12