Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P31378

Metabolite ID
P31378
Deionized mass
914.4481 Da
Average m/z
915.4525
Average RT
16.3249
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)8.255e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)4.36e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.99e-14
Glyma.15G019600 hypothetical protein AT5G48120:MET18:ARM repeat superfamily protein 2Chr15:1524472–1536978 (-)2.382e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)5.254e-12
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)1.615e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)7.115e-11
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)7.615e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.152e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.765e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.165e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.834e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.834e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)7.263e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)2.904e-12
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)2.904e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.826e-11
Glyma.10G274700 hypothetical protein AT1G68560:XYL1:alpha-xylosidase 1__AT3G45940:AT3G45940:Glycosyl hydrolases family 31 protein 1Chr10:49769554–49774168 (-)8.498e-11
Glyma.12G033700 hypothetical protein AT4G34830:MRL1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr12:2533993–2544977 (+)9.477e-12
Glyma.12G035600 hypothetical protein AT5G45600:GAS41:YEATS family protein 1Chr12:2597690–2600977 (+)6.33e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)7.477e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)7.477e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.464e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.464e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.935e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.935e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)4.661e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.66e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)4.66e-12
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)9.029e-11
Glyma.13G183400 hypothetical protein NA 1Chr13:29666942–29670201 (+)7.754e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.99e-14
Glyma.15G019700 hypothetical protein AT3G21360:AT3G21360:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 1Chr15:1539104–1541259 (+)9.246e-11
Glyma.15G019800 hypothetical protein AT1G51940:LYK3:protein kinase family protein / peptidoglycan-binding LysM domain-containing protein 1Chr15:1540655–1547540 (-)9.246e-11
Glyma.15G020300 hypothetical protein AT1G51950:IAA18:indole-3-acetic acid inducible 18__AT3G16500:PAP1:phytochrome-associated protein 1 1Chr15:1573643–1577917 (+)1.472e-11
Glyma.15G020800 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr15:1605458–1610034 (-)4.449e-11
Glyma.15G021000 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr15:1616486–1626531 (-)4.449e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.838e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.067e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)8.255e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)8.255e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)7.002e-12
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)1.501e-12
Glyma.16G138500 hypothetical protein NA 1Chr16:29564872–29566190 (+)2.52e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)5.214e-13
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)4.189e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.316e-16
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)1.603e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)4.43e-12
Glyma.18G213300 hypothetical protein AT5G43180:AT5G43180:transmembrane protein, putative (Protein of unknown function, DUF599) 1Chr18:50026808–50028261 (-)9.791e-14
Glyma.18G213400 hypothetical protein NA 1Chr18:50037003–50043647 (+)9.791e-14
Glyma.18G214000 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr18:50088148–50092969 (-)1.943e-12
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)8.363e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.334e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.334e-11
Glyma.19G032800 hypothetical protein NA 1Chr19:4196959–4199265 (-)5.82e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.11e-11
Glyma.20G022500 hypothetical protein NA 1Chr20:2342943–2353164 (+)2.083e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)8.804e-12