Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P31611

Metabolite ID
P31611
Deionized mass
302.0922 Da
Average m/z
303.0983
Average RT
16.3919
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
80
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

80 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.185e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.301e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 3Chr16:30652378–30659548 (+)2.249e-14
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)3.034e-14
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)2.484e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.509e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.509e-14
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)8.936e-14
Glyma.16G180100 hypothetical protein NA 2Chr16:34070806–34076053 (+)2.5e-13
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)2.088e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)8.033e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.185e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)7.732e-11
Glyma.01G174300 hypothetical protein NA 1Chr01:51115502–51120201 (+)2.059e-12
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 1Chr01:51138854–51141103 (+)2.059e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.603e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.055e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.081e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.471e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)3.222e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.995e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)4.716e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)4.716e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)4.716e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.559e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.559e-13
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.301e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.301e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)7.418e-13
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)9.102e-13
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)1.209e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.744e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)4.654e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)1.982e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)9.876e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)6.483e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)2.382e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)2.382e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.328e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.328e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.271e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)8.271e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)7.003e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.245e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.509e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.509e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.199e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)8.936e-14
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)2.847e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)8.644e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)7.416e-12
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)6.044e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)7.243e-13
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.275e-14
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)7.984e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)9.187e-12
Glyma.16G144200 hypothetical protein AT3G50380:AT3G50380:vacuolar protein sorting-associated protein, putative (DUF1162) 1Chr16:30434508–30475458 (-)6.81e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)5.929e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.249e-14
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)3.212e-13
Glyma.16G145300 hypothetical protein AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 1Chr16:30604586–30608656 (+)6.136e-13
Glyma.16G145400 hypothetical protein AT3G12090:TET6:tetraspanin6 1Chr16:30624348–30627475 (+)2.909e-11
Glyma.16G145500 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 1Chr16:30630177–30636253 (+)2.762e-13
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.76e-12
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)4.65e-11
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)2.5e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)6.323e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)1.475e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.398e-13
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)8.033e-12
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)3.965e-11
Glyma.18G301600 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 1Chr18:57939468–57945328 (+)8.649e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)6.519e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.16e-16
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.16e-16
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)5.788e-13
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.403e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)6.75e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.543e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)4.986e-11