Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P31635

Metabolite ID
P31635
Deionized mass
152.1180 Da
Average m/z
305.2442
Average RT
16.3973
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.87e-12
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 2Chr03:2202325–2234931 (+)9.828e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)9.695e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.488e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.419e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)4.169e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.647e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)7.681e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.709e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.709e-12
Glyma.06G129400 hypothetical protein AT5G24300:SS1:Glycogen/starch synthases, ADP-glucose type 1Chr06:10632042–10640023 (+)1.113e-12
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)2.108e-14
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)2.108e-14
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)2.94e-14
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)6.837e-11
Glyma.06G203300 hypothetical protein AT1G18640:PSP:3-phosphoserine phosphatase 1Chr06:19025714–19030363 (+)2.853e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)8.296e-15
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.87e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.87e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)9.438e-13
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)9.695e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)9.695e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)9.695e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)9.695e-12
Glyma.08G296900 hypothetical protein NA 1Chr08:41297891–41301852 (+)6.031e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.301e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.846e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)7.348e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.192e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.192e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)2.074e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.419e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.5e-11
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:2374161–2391216 (-)9.125e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.708e-14
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.708e-14
Glyma.16G038900 hypothetical protein AT3G03790:AT3G03790:ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein 1Chr16:3666547–3676052 (+)7.893e-11
Glyma.16G039800 hypothetical protein NA 1Chr16:3730538–3733668 (-)2.325e-12
Glyma.16G040000 hypothetical protein NA 1Chr16:3753129–3755763 (+)7.62e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.386e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.516e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)8.831e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)3.633e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)3.633e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.591e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.591e-13
Glyma.20G084500 hypothetical protein AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A 1Chr20:31666190–31674959 (-)3.303e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)3.336e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.394e-12