SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G317100

Description hypothetical protein

Gene interval Chr06:50586679–50589765 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G61520:AT5G61520:Major facilitator superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features876Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records45

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0514.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

876 matching features · page 42 of 88

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P25579 UCL 1684 492.2320 17.808e-12
P25590 No candidate annotation 545.2093 16.968e-11
P25658 No candidate annotation 575.2729 13.578e-12
P25756 Ipsapirone 401.1534 15.225e-11
P25834 2-Aminoadenosine 282.1077 13.236e-12
P25891 Iryantherin F 766.2578 15.597e-12
P25958 Pestalotheol B 296.1612 12.07e-12
P25985 Rhamnazin 3-isorhamninoside 784.2535 14.161e-12
P26208 Napsamycin C 854.3262 17.596e-11
P26254 6,7,3',4'-Tetrahydroxyaurone 6-(2'',4'',6''-triacetylglucoside) 574.1357 12.427e-11