Overview Annotation GWAS Evidence Associated genes

P25590

Metabolite ID
P25590
Deionized mass
545.2093 Da
Average m/z
546.2180
Average RT
14.7288
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
34
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

34 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)2.655e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.405e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.405e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)8.43e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.592e-16
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)6.968e-11
Glyma.08G338200 hypothetical protein NA 1Chr08:45509289–45511145 (+)4.936e-11
Glyma.08G338600 hypothetical protein NA 1Chr08:45522321–45523727 (-)4.936e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)4.936e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.641e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)4.094e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)3.194e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)4.312e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)4.312e-12
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)5.805e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.231e-11
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)1.567e-11
Glyma.11G109900 hypothetical protein AT4G27630:GTG2:GPCR-type G protein 2 1Chr11:8378708–8386493 (-)3.305e-11
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)3.857e-11
Glyma.13G200800 hypothetical protein AT2G21510:AT2G21510:DNAJ heat shock N-terminal domain-containing protein 1Chr13:31438634–31445721 (+)4.996e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)9.833e-12
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.548e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)1.092e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)3.59e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.94e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.423e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.895e-11
Glyma.16G129800 hypothetical protein AT2G18030:MSRA5:Peptide methionine sulfoxide reductase family protein 1Chr16:28282989–28287753 (+)6.708e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)6.221e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)6.221e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)4.121e-13
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)5.92e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)3.683e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.005e-13