SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G305700

Description hypothetical protein

Gene interval Chr06:49451501–49461369 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G05710:ACO3:aconitase 3

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1299Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records1289

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 3.0062.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1299 matching features · page 53 of 130

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P22895 FD 212 268.1299 32.093e-15
P22941 Masutakeside I 620.2034 32.333e-12
P23036 No candidate annotation 609.2223 38.252e-13
P23100 No candidate annotation 785.2951 32.592e-11
P23128 Fenozan 50F 370.1396 31.708e-14
P23137 Fentrazamide 349.1306 38.037e-12
P23160 9,13-dihydroxy-10-ethoxy-11-octadecenoic acid 358.2677 39.299e-12
P23163 Urdamycinone F 504.1630 33.215e-11
P23295 3beta-(4-Iodophenyl)tropan-2beta-carboxylic acid isopropyl ester 413.0800 32.605e-14
P23330 N-[2-(3,5-Dioxopiperazino)propyl]-N-(2-amino-2-oxoethyl)glycine 286.1280 32.599e-12