Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23330

Metabolite ID
P23330
Deionized mass
286.1280 Da
Average m/z
287.1362
Average RT
14.0984
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.599e-12
Glyma.08G123500 hypothetical protein NA 3Chr08:9494946–9505931 (-)1.179e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)1.363e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)8.106e-14
Glyma.17G092800 hypothetical protein NA 2Chr17:7253511–7255621 (-)3.117e-15
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)2.267e-13
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)4.525e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)1.128e-11
Glyma.06G037500 hypothetical protein NA 1Chr06:2876797–2877488 (+)5.49e-12
Glyma.06G037800 hypothetical protein NA 1Chr06:2894530–2896325 (-)6.32e-12
Glyma.06G038900 hypothetical protein AT5G42700:AT5G42700:AP2/B3-like transcriptional factor family protein 1Chr06:2943383–2947586 (+)2.679e-11
Glyma.06G039000 hypothetical protein AT1G47380:AT1G47380:Protein phosphatase 2C family protein 1Chr06:2949704–2954653 (+)1.574e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.226e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.226e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)2.767e-11
Glyma.06G129400 hypothetical protein AT5G24300:SS1:Glycogen/starch synthases, ADP-glucose type 1Chr06:10632042–10640023 (+)3.244e-14
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)7.598e-16
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)7.598e-16
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)2.873e-15
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)5.217e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)9.676e-11
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)3.184e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.599e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.599e-12
Glyma.08G037200 hypothetical protein NA 1Chr08:2941692–2944913 (+)1.937e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.352e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.352e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.352e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.352e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)3.699e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)3.039e-12
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)9.582e-13
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.193e-11
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)9.945e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)5.598e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)4.761e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)6.689e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.977e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.977e-13
Glyma.19G147000 hypothetical protein NA 1Chr19:40784257–40785271 (-)1.705e-11
Glyma.19G147100 hypothetical protein NA 1Chr19:40799107–40802473 (+)1.705e-11
Glyma.19G148100 hypothetical protein AT2G42070:NUDX23:nudix hydrolase homolog 23 1Chr19:40872657–40877411 (+)9.062e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)8.925e-14