Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23137

Metabolite ID
P23137
Deionized mass
349.1306 Da
Average m/z
350.1360
Average RT
14.0502
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
115
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

115 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)2.098e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.296e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)8.037e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)1.867e-11
Glyma.18G267500 hypothetical protein NA 3Chr18:55179516–55181798 (-)1.267e-12
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 2Chr03:2202325–2234931 (+)7.844e-12
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)1.313e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)3.389e-15
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.389e-15
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 2Chr09:46835469–46838091 (-)1.41e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.938e-11
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 2Chr10:3270545–3283318 (-)7.098e-11
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)4.994e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 2Chr11:9667918–9671917 (-)6.473e-17
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.296e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)9.516e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)9.372e-12
Glyma.01G231400 hypothetical protein AT4G25340:FKBP53:FK506 BINDING PROTEIN 53 1Chr01:55836387–55840615 (+)8.523e-13
Glyma.01G231700 hypothetical protein AT4G10180:DET1:light-mediated development protein 1 / deetiolated1 (DET1) 1Chr01:55856415–55863866 (+)4.499e-11
Glyma.01G231900 hypothetical protein AT1G71500:AT1G71500:Rieske (2Fe-2S) domain-containing protein 1Chr01:55869836–55872417 (+)1.115e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)4.499e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.845e-14
Glyma.03G027900 hypothetical protein AT2G45270:GCP1:glycoprotease 1 1Chr03:3048805–3061575 (-)8.457e-11
Glyma.03G041900 hypothetical protein NA 1Chr03:5313339–5315847 (-)6.94e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)8.664e-15
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)1.685e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)8.092e-15
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)2.097e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)8.85e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.37e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)2.691e-13
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.848e-15
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.848e-15
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.848e-15
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)3.634e-13
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)3.634e-13
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)5.513e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)8.037e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)8.037e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.731e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)2.322e-14
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.389e-15
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.389e-15
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.389e-15
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)5e-11
Glyma.09G011700 hypothetical protein NA 1Chr09:894858–897607 (-)8.242e-12
Glyma.09G012200 hypothetical protein AT2G35760:AT2G35760:Uncharacterized protein family (UPF0497) 1Chr09:937048–940244 (+)9.808e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.965e-18
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.235e-13
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)6.15e-12
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)3.319e-12
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)1.98e-11
Glyma.09G252400 hypothetical protein NA 1Chr09:47260143–47260334 (+)1.98e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)4.956e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)4.956e-12
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)7.096e-13
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)8.364e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)3.284e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)6.1e-11
Glyma.10G038200 hypothetical protein NA 1Chr10:3394443–3395342 (-)2.398e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)9.114e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)9.114e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)9.114e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)9.114e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.184e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)3.893e-12
Glyma.11G094700 hypothetical protein AT5G08280:HEMC:hydroxymethylbilane synthase 1Chr11:7190632–7195838 (-)5.562e-14
Glyma.11G095000 hypothetical protein NA 1Chr11:7206492–7209711 (-)8.417e-13
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)1.603e-12
Glyma.11G105500 hypothetical protein AT2G16640:TOC132:multimeric translocon complex in the outer envelope membrane 132 1Chr11:8015639–8020644 (-)7.198e-12
Glyma.11G122500 hypothetical protein AT1G49430:LACS2:long-chain acyl-CoA synthetase 2 1Chr11:9336389–9344401 (+)5.204e-12
Glyma.11G122700 hypothetical protein NA 1Chr11:9354319–9356396 (-)5.564e-11
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)1.352e-14
Glyma.11G126100 hypothetical protein AT1G08450:CRT3:calreticulin 3 1Chr11:9581659–9588340 (+)7.603e-15
Glyma.11G126800 hypothetical protein AT1G06050:AT1G06050:ENHANCED DISEASE RESISTANCE-like protein (DUF1336) 1Chr11:9647447–9649369 (+)8.193e-13
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)6.473e-17
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)6.474e-17
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)6.244e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)3.782e-11
Glyma.14G198600 hypothetical protein NA 1Chr14:46360801–46362778 (+)6.523e-13
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)3.088e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.452e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.861e-14
Glyma.15G152200 hypothetical protein NA 1Chr15:12632591–12637748 (+)1.41e-11
Glyma.15G152400 hypothetical protein NA 1Chr15:12641790–12646649 (+)1.41e-11
Glyma.15G152800 hypothetical protein NA 1Chr15:12669438–12671888 (+)1.411e-11
Glyma.15G152900 hypothetical protein AT4G15755:AT4G15755:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr15:12680146–12681864 (-)2.123e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)2.723e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)7.204e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)8.436e-15
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)2.309e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)4.467e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)1.867e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.286e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.285e-13
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.923e-13
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.923e-13
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)3.206e-12
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)1.216e-11
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)2.025e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.596e-13
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)9.276e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)5.756e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.22e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)5.347e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)5.069e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.592e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.592e-13
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)1.096e-12
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)1.57e-11
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)1.441e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)2.96e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)2.779e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.645e-13
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)3.02e-11