Overview Annotation GWAS Evidence Associated genes

P23163

Metabolite ID
P23163
Deionized mass
504.1630 Da
Average m/z
505.1692
Average RT
14.0558
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
144
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

144 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.215e-11
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)7.659e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)2.582e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 2Chr03:5113019–5121557 (+)2.966e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 2Chr03:44064511–44073939 (+)1.523e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)1.402e-11
Glyma.05G164700 hypothetical protein NA 2Chr05:35543931–35549196 (-)1.652e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.804e-11
Glyma.15G152400 hypothetical protein NA 2Chr15:12641790–12646649 (+)8.057e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)2.181e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.294e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.294e-13
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)3.981e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.913e-13
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)6.005e-11
Glyma.03G008300 hypothetical protein AT4G00400:GPAT8:glycerol-3-phosphate acyltransferase 8 1Chr03:801855–806650 (-)1.364e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)8.099e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)2.127e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.249e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.042e-17
Glyma.03G041800 hypothetical protein NA 1Chr03:5307518–5311842 (+)4.413e-11
Glyma.03G041900 hypothetical protein NA 1Chr03:5313339–5315847 (-)5.516e-11
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)9.062e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.41e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.377e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)5.282e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.067e-13
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)2.563e-11
Glyma.05G130600 hypothetical protein AT1G30040:GA2OX2:gibberellin 2-oxidase 1Chr05:32352085–32354865 (+)4.588e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)5.769e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)9.001e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.505e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.777e-13
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)4.087e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)4.087e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)4.087e-12
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)2.465e-13
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)2.465e-13
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)2.532e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)2.192e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.215e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.215e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)7.059e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)7.059e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)3.769e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)3.769e-11
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)7.059e-11
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)3.131e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)9.442e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)2.119e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.678e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.537e-14
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.804e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.804e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.804e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.804e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.43e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.43e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.807e-13
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.165e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.035e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.218e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.512e-14
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.512e-14
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.512e-14
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.512e-14
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.158e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)6.084e-15
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)7.348e-12
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 1Chr11:2678678–2681764 (-)2.527e-13
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.027e-14
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.987e-16
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.002e-15
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.002e-15
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.002e-15
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.002e-15
Glyma.11G062400 hypothetical protein AT4G36860:AT4G36860:LIM domain-containing protein 1Chr11:4720040–4726569 (+)1.263e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)5.08e-11
Glyma.11G065000 hypothetical protein AT4G36730:GBF1:G-box binding factor 1 1Chr11:4916855–4922192 (+)8.397e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)3.177e-12
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)8.297e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)9.56e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)9.56e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)9.56e-13
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)5.767e-12
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)5.585e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.81e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.81e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.362e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.362e-13
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)1.46e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.982e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.982e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.771e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.771e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.771e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)4.67e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)2.544e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.468e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.608e-13
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)4.705e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)6.742e-14
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.345e-14
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.02e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.344e-14
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.345e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.122e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.071e-15
Glyma.15G152200 hypothetical protein NA 1Chr15:12632591–12637748 (+)8.057e-12
Glyma.15G152800 hypothetical protein NA 1Chr15:12669438–12671888 (+)8.057e-12
Glyma.15G152900 hypothetical protein AT4G15755:AT4G15755:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr15:12680146–12681864 (-)6.143e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)1.001e-14
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)1.233e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)9.546e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.533e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.533e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)2.16e-15
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)4.758e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.286e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.181e-12
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)1.506e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.444e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)2.876e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)9.587e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.758e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)2.582e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.034e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.034e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.865e-13
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.865e-13
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)4.319e-12
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)8.689e-13
Glyma.18G262800 hypothetical protein NA 1Chr18:54832649–54833890 (+)2.029e-11
Glyma.18G263300 hypothetical protein AT5G39420:cdc2cAt:CDC2C 1Chr18:54865827–54872924 (-)4.434e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)4.132e-16
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.399e-15
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)9.543e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)8.26e-13
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)1.534e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)3.218e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)7.681e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)4.349e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.634e-14
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)7.591e-12