SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G168700

Description hypothetical protein

Gene interval Chr06:14104416–14111842 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G63520:AT5G63520:F-box/LRR protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features83Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records37

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4458.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

83 matching features · page 4 of 9

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P43039 10-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-decanoic acid 461.2433 28.526e-12
P47459 Ergophilone A 820.4076 22.633e-11
P47499 1-Naphthylacetylspermine 370.2739 23.051e-11
P48941 Chlorphentermine 183.0837 25.617e-11
P49160 No candidate annotation 924.4051 25.791e-11
P50072 Swietephragmin F 654.2667 21.543e-11
P51156 9R-hydroxy-2E,4E-decadienoic acid 184.1097 21.404e-12
P01724 Lactulose 342.1143 13.763e-13
P06276 Emricasan 569.1723 16.859e-11
P06761 Carthamoside B4 506.1973 11.7e-12