SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G112700

Description hypothetical protein

Gene interval Chr06:9156973–9158659 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1840Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0016.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1840 matching features · page 18 of 184

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05511 6-Aminopenicillanate 216.0563 11.207e-11
P05532 Buntansin C 322.1092 13.6e-11
P05577 Methyl syringate 212.0693 17.001e-12
P05580 Pefloxacin 333.1508 11.111e-11
P05624 Imicyafos 304.1113 13.538e-11
P05631 Trimethyl orthoacetate 120.0775 15.125e-12
P05640 Lysylproline 243.1540 11.393e-11
P05656 6,7-Dimethoxy-2-(piperazin-1-yl)quinazolin-4-amine 289.1577 12.325e-12
P05696 5'-O-beta-D-Glucosylpyridoxine 331.1264 12.31e-11
P05742 (Salicyl)adenylate 467.0872 17.281e-11