P05640
Metabolite ID
P05640
Deionized mass
243.1540 Da
Average m/z
244.1613
Average RT
8.7968
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
77
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
77 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G181100 | hypothetical protein | NA | 8 | Chr16:34198761–34209007 (-) | 9.545e-11 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 3 | Chr13:24677399–24693129 (-) | 1.226e-13 | |
| Glyma.16G147900 | hypothetical protein | NA | 3 | Chr16:30864919–30872425 (+) | 2.18e-14 | |
| Glyma.16G172800 | hypothetical protein | AT3G49142:AT3G49142:Tetratricopeptide repeat (TPR)-like superfamily protein | 3 | Chr16:33359317–33362446 (+) | 1.901e-15 | |
| Glyma.09G277300 | hypothetical protein | NA | 2 | Chr09:49271634–49276648 (-) | 4.838e-12 | |
| Glyma.16G146700 | hypothetical protein | NA | 2 | Chr16:30755899–30759360 (-) | 6.689e-12 | |
| Glyma.16G173100 | hypothetical protein | AT5G52920:PKP-BETA1:plastidic pyruvate kinase beta subunit 1 | 2 | Chr16:33368628–33375202 (-) | 2.652e-12 | |
| Glyma.02G287700 | hypothetical protein | AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … | 1 | Chr02:46797935–46805223 (-) | 8.747e-12 | |
| Glyma.02G289000 | hypothetical protein | AT5G54800:GPT1:glucose 6-phosphate/phosphate translocator 1 | 1 | Chr02:46898427–46902989 (+) | 3.395e-11 | |
| Glyma.02G295900 | hypothetical protein | NA | 1 | Chr02:47375932–47378006 (+) | 1.784e-14 | |
| Glyma.02G296200 | hypothetical protein | AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 | 1 | Chr02:47383044–47395946 (-) | 1.784e-14 | |
| Glyma.02G296300 | hypothetical protein | AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein | 1 | Chr02:47399263–47406220 (-) | 2.624e-13 | |
| Glyma.03G040600 | hypothetical protein | AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 | 1 | Chr03:5113019–5121557 (+) | 7.666e-11 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 8.65e-12 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 5.465e-11 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 5.465e-11 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 5.465e-11 | |
| Glyma.05G137500 | hypothetical protein | NA | 1 | Chr05:33012282–33015297 (-) | 9.103e-11 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 1.315e-11 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 2.979e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 6.276e-15 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.75e-13 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 3.953e-14 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1 | Chr06:9113982–9118848 (-) | 1.393e-11 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr06:9134358–9144986 (+) | 1.393e-11 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:9156973–9158659 (+) | 1.393e-11 | |
| Glyma.06G317100 | hypothetical protein | AT5G61520:AT5G61520:Major facilitator superfamily protein | 1 | Chr06:50586679–50589765 (+) | 5.854e-11 | |
| Glyma.08G150100 | hypothetical protein | AT2G44450:BGLU15:beta glucosidase 15 | 1 | Chr08:11525692–11536927 (+) | 9.938e-11 | |
| Glyma.08G220200 | hypothetical protein | AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | 1 | Chr08:17889781–17898867 (+) | 8.124e-11 | |
| Glyma.09G080200 | hypothetical protein | NA | 1 | Chr09:9256042–9263239 (-) | 3.235e-12 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 1.141e-12 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 1.051e-11 | |
| Glyma.09G249500 | hypothetical protein | NA | 1 | Chr09:47056885–47062577 (+) | 1.673e-14 | |
| Glyma.09G272300 | hypothetical protein | AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein | 1 | Chr09:48873276–48883421 (-) | 1.652e-11 | |
| Glyma.09G272800 | hypothetical protein | AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein | 1 | Chr09:48916725–48921396 (+) | 1.652e-11 | |
| Glyma.09G281400 | hypothetical protein | AT3G18620:AT3G18620:DHHC-type zinc finger family protein | 1 | Chr09:49668985–49676216 (-) | 2.523e-11 | |
| Glyma.09G281700 | hypothetical protein | NA | 1 | Chr09:49705303–49733182 (-) | 2.523e-11 | |
| Glyma.09G282900 | hypothetical protein | AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 | 1 | Chr09:49863377–49871270 (+) | 4.99e-11 | |
| Glyma.11G161900 | hypothetical protein | NA | 1 | Chr11:14992307–14994409 (-) | 1.721e-13 | |
| Glyma.11G162500 | hypothetical protein | AT2G40435:AT2G40435:transcription factor SCREAM-like protein | 1 | Chr11:15087390–15090683 (-) | 2.403e-12 | |
| Glyma.11G240600 | hypothetical protein | NA | 1 | Chr11:33491895–33493311 (+) | 4.793e-11 | |
| Glyma.12G183700 | hypothetical protein | AT2G27600:SKD1:AAA-type ATPase family protein | 1 | Chr12:34470517–34477475 (-) | 4.47e-11 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 4.859e-11 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 4.859e-11 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 3.279e-12 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 2.656e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 2.656e-11 | |
| Glyma.13G095000 | hypothetical protein | NA | 1 | Chr13:21005327–21006774 (-) | 4.352e-13 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 1.226e-13 | |
| Glyma.13G134500 | hypothetical protein | AT3G09560:PAH1:Lipin family protein | 1 | Chr13:24696109–24705068 (-) | 6.321e-12 | |
| Glyma.13G161900 | PAP25 | purple acid phosphatase | AT5G34850:PAP26:purple acid phosphatase 26 | 1 | Chr13:27748190–27752685 (-) | 2.506e-11 |
| Glyma.14G093100 | hypothetical protein | NA | 1 | Chr14:8654730–8655892 (-) | 1.695e-11 | |
| Glyma.14G201600 | hypothetical protein | NA | 1 | Chr14:46703283–46706500 (+) | 1.156e-11 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 1.156e-11 | |
| Glyma.15G035600 | hypothetical protein | AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III | 1 | Chr15:2830678–2835534 (+) | 2.717e-12 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 3.452e-15 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 8.734e-15 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 3.452e-15 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 3.452e-15 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 7.461e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 3.686e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 1.123e-11 | |
| Glyma.16G144700 | hypothetical protein | AT5G66960:AT5G66960:Prolyl oligopeptidase family protein | 1 | Chr16:30514629–30519598 (+) | 6.779e-11 | |
| Glyma.16G145100 | hypothetical protein | NA | 1 | Chr16:30578388–30581421 (-) | 1.694e-12 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 1 | Chr16:30652378–30659548 (+) | 1.694e-12 | |
| Glyma.16G146300 | hypothetical protein | NA | 1 | Chr16:30714315–30716624 (+) | 6.689e-12 | |
| Glyma.16G147000 | hypothetical protein | NA | 1 | Chr16:30773803–30777822 (-) | 5.976e-11 | |
| Glyma.16G147400 | hypothetical protein | NA | 1 | Chr16:30817535–30821568 (+) | 2.758e-11 | |
| Glyma.16G173000 | hypothetical protein | NA | 1 | Chr16:33365497–33367017 (+) | 3.028e-15 | |
| Glyma.16G173400 | hypothetical protein | AT5G52900:MAKR6:membrane-associated kinase regulator | 1 | Chr16:33388036–33390085 (+) | 8.314e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 2.407e-16 | |
| Glyma.16G181000 | hypothetical protein | NA | 1 | Chr16:34189551–34197531 (+) | 9.545e-11 | |
| Glyma.16G181300 | hypothetical protein | NA | 1 | Chr16:34225053–34233073 (-) | 9.545e-11 | |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 5.853e-11 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 5.853e-11 | |
| Glyma.17G145500 | hypothetical protein | AT4G17510:UCH3:ubiquitin C-terminal hydrolase 3 | 1 | Chr17:11947484–11955499 (-) | 3.718e-11 | |
| Glyma.18G266100 | hypothetical protein | NA | 1 | Chr18:55052591–55056489 (-) | 7.738e-11 |