Overview Annotation GWAS Evidence Associated genes

P05624

Metabolite ID
P05624
Deionized mass
304.1113 Da
Average m/z
305.1177
Average RT
8.7923
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
32
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

32 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)7.938e-14
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)1.273e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.802e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.492e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.492e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.716e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.595e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.595e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.595e-12
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.189e-12
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.189e-12
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.189e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)3.657e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.538e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.538e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.538e-11
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)3.215e-11
Glyma.09G053800 hypothetical protein NA 1Chr09:4737413–4755632 (-)1.386e-11
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)3.215e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.959e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)1.416e-13
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)1.416e-13
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)1.416e-13
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.267e-12
Glyma.15G049000 hypothetical protein NA 1Chr15:3866108–3867740 (+)5.242e-11
Glyma.15G049800 hypothetical protein NA 1Chr15:3927843–3933656 (-)7.389e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.989e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.432e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.989e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.989e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.591e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)9.358e-11