SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 66 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P10660 L-gamma-Glutamyl-S-allylthio-L-cysteine 322.0663 11.742e-13
P10668 2,5-Dimethyl-1H-pyrrole 95.0734 12.246e-11
P10671 Endothal-disodium 186.0520 17.419e-12
P10685 Methionyl-Methionine 280.0916 11.206e-12
P10689 1-(Pentafluorophenyl)propane 210.0480 13.738e-14
P10719 No candidate annotation 948.2268 13.884e-12
P10731 Lachnanthocarpone 288.0816 14.44e-13
P10739 Antibiotic D 788-7 515.1878 12.877e-13
P10746 No candidate annotation 577.1760 11.955e-11
P10785 Pteledimerine 482.2205 11.247e-15