Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P10671

Metabolite ID
P10671
Deionized mass
186.0520 Da
Average m/z
187.0588
Average RT
10.5217
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
109
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

109 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.365e-15
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)3.784e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)7.697e-12
Glyma.13G133800 hypothetical protein AT3G53520:UXS1:UDP-glucuronic acid decarboxylase 1 2Chr13:24601574–24606756 (-)2.52e-13
Glyma.13G133900 hypothetical protein NA 2Chr13:24613843–24616128 (+)2.52e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)8.465e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)8.465e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)8.758e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)3.367e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.629e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)6.869e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.763e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.763e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.168e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)6.529e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.347e-14
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.924e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.353e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)2.853e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)7.419e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.727e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.727e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.727e-13
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)1.171e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.763e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.346e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.675e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.643e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.643e-13
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 1Chr06:10356650–10362151 (-)4.746e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)2.994e-15
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)3.551e-14
Glyma.06G260200 hypothetical protein AT1G60690:AT1G60690:NAD(P)-linked oxidoreductase superfamily protein__AT1G60710:ATB2:NAD(P)-linked oxidoreductase super… 1Chr06:44529441–44533552 (-)8.399e-11
Glyma.06G260300 hypothetical protein AT1G60730:AT1G60730:NAD(P)-linked oxidoreductase superfamily protein 1Chr06:44535490–44539648 (-)8.398e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)7.685e-11
Glyma.06G301100 hypothetical protein AT2G16030:AT2G16030:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr06:49013527–49014231 (+)2.366e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.934e-12
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)9.468e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)6.944e-11
Glyma.08G148500 hypothetical protein AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:11362991–11368184 (-)1.014e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)6.332e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.635e-13
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.86e-11
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)1.032e-11
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)7.47e-11
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)5.517e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.129e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.153e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.03e-14
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)2.189e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)6.107e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.975e-11
Glyma.10G274700 hypothetical protein AT1G68560:XYL1:alpha-xylosidase 1__AT3G45940:AT3G45940:Glycosyl hydrolases family 31 protein 1Chr10:49769554–49774168 (-)2.812e-11
Glyma.11G070700 hypothetical protein NA 1Chr11:5282926–5287258 (+)4.46e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)7.998e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.465e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.465e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)4.248e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)5.319e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.264e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)6.264e-11
Glyma.13G134000 hypothetical protein NA 1Chr13:24618272–24619048 (-)2.52e-13
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.365e-15
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.514e-14
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.098e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.098e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.465e-13
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.338e-12
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)1.337e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)6.723e-13
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)7.671e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)7.671e-11
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)8.443e-11
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)7.506e-13
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)1.842e-11
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)9.7e-12
Glyma.15G111000 hypothetical protein AT1G62305:AT1G62305:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein__AT1G11940:AT1G11940:Cor… 1Chr15:8692505–8697919 (-)8.693e-13
Glyma.15G111200 hypothetical protein AT1G11950:AT1G11950:Transcription factor jumonji (jmjC) domain-containing protein 1Chr15:8705907–8710609 (-)1.993e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.903e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.776e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.903e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.903e-11
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)6.41e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.536e-13
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)5.531e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)8.181e-11
Glyma.16G200300 hypothetical protein NA 1Chr16:36137903–36140971 (+)8.124e-12
Glyma.16G200400 hypothetical protein NA 1Chr16:36151273–36155406 (+)8.187e-11
Glyma.16G200500 hypothetical protein AT5G51840:AT5G51840:junctophilin-like protein 1Chr16:36163525–36167913 (-)8.187e-11
Glyma.16G200600 hypothetical protein AT5G51830:AT5G51830:pfkB-like carbohydrate kinase family protein 1Chr16:36173339–36177658 (-)8.187e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)8.255e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)3.944e-12
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)2.16e-12
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)2.16e-12
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)2.16e-12
Glyma.17G211500 hypothetical protein AT4G32272:AT4G32272:Nucleotide/sugar transporter family protein 1Chr17:34916813–34922875 (+)8.056e-11
Glyma.17G211600 hypothetical protein NA 1Chr17:34925097–34929797 (+)9.967e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)6.903e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)4.085e-11
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)6.177e-12
Glyma.18G091600 hypothetical protein NA 1Chr18:9165090–9166656 (-)3.148e-11
Glyma.18G194900 hypothetical protein NA 1Chr18:46855096–46855729 (+)3.546e-11
Glyma.18G197500 hypothetical protein NA 1Chr18:47377826–47380850 (+)4.385e-11
Glyma.19G102000 ICE2 AT3G26744:ICE1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:34998146–35001862 (+)3.092e-12
Glyma.19G102200 hypothetical protein AT2G31410:AT2G31410:coiled-coil protein 1Chr19:35024582–35025690 (+)3.092e-12
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)6.968e-13
Glyma.19G222200 hypothetical protein NA 1Chr19:47439424–47441508 (+)4.6e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.497e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.911e-14