SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 46 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P08045 Dehydrolirinidine 279.1254 11.433e-13
P08052 L-Arogenate 227.0777 13.99e-17
P08061 No candidate annotation 288.5719 11.354e-12
P08079 Tame 342.1392 13.194e-11
P08094 Triethylene Glycol Monomethyl Ether 164.1033 14.884e-11
P08097 Alaptide 182.1027 11.162e-11
P08101 No candidate annotation 785.2004 17.155e-11
P08107 Methyl syramuraldehydate 242.0796 14.91e-11
P08122 xi-5-Acetyltetrahydro-2(3H)-furanone 128.0463 11.288e-11
P08139 Goniolactone B 472.1526 12.153e-13