Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08107

Metabolite ID
P08107
Deionized mass
242.0796 Da
Average m/z
243.0865
Average RT
9.6874
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
77
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

77 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.849e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)4.057e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.863e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.464e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.066e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)1.825e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)5.034e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.587e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.587e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)1.474e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)3.942e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)6.74e-12
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.274e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.082e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.072e-13
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.541e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.349e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.91e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.39e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.39e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.39e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)4.183e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.792e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.759e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.865e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.967e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)6.916e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)6.916e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)6.916e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)7.464e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.372e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.372e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)8.498e-12
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)4.306e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.026e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)1.762e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)1.762e-11
Glyma.07G078300 hypothetical protein NA 1Chr07:7150800–7154478 (-)2.542e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)4.488e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)1.754e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.594e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.307e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)7.478e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)6.247e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)9.837e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)5.263e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.896e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)3.896e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)3.896e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.873e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)2.293e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.117e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.563e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)5.626e-12
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)4.72e-12
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)4.72e-12
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)4.72e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.847e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.464e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)7.016e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)1.516e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.077e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.352e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.849e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.849e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.849e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.849e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.99e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.64e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.033e-13
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.066e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)6.417e-11
Glyma.18G079000 hypothetical protein NA 1Chr18:7595306–7600287 (-)1.726e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.825e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)5.507e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.34e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.34e-12