Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P08079

Metabolite ID
P08079
Deionized mass
342.1392 Da
Average m/z
343.1448
Average RT
9.6736
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
89
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

89 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)3.123e-11
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.206e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.005e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)7.647e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)2.879e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.418e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)4.706e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)4.707e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)4.707e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)6.36e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.594e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.594e-14
Glyma.13G184500 hypothetical protein NA 2Chr13:29829471–29834027 (+)6.469e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.845e-13
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)4.129e-14
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)6.85e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.206e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.622e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)8.563e-12
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)7.761e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.21e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.21e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)1.42e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.894e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.194e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.173e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.173e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.173e-11
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)2.584e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.396e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.901e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.964e-14
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.005e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.005e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)8.431e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)8.431e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.727e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)5.5e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)1.008e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)4.521e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)5.418e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.418e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.418e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)6.973e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.83e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.421e-12
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)5.065e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)2.629e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)4.29e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)4.707e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)4.707e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)4.707e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)4.707e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)4.707e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)6.465e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.698e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.698e-12
Glyma.12G197600 hypothetical protein AT4G03210:XTH9:xyloglucan endotransglucosylase/hydrolase 9 1Chr12:35879106–35881779 (+)1.629e-11
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)1.891e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)6.359e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.008e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.008e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.594e-14
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.141e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.049e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.114e-17
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.123e-11
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)4.448e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)6.036e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)9.127e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)9.911e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.48e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)3.675e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)9.435e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.186e-11
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)1.847e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)6.045e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)2.871e-15
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.143e-13
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)9.623e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.838e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.838e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.306e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.664e-12
Glyma.20G099200 hypothetical protein AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 co… 1Chr20:34242852–34248956 (-)5.993e-11
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 1Chr20:34888699–34893605 (-)7.083e-12
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)1.012e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)5.365e-12
Glyma.20G112600 hypothetical protein AT5G04310:AT5G04310:Pectin lyase-like superfamily protein 1Chr20:35468911–35474203 (+)3.098e-11