SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 339 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P49855 Pumilaisoflavone A 464.1833 19.577e-12
P49915 (6Z,8Z)-Hexadeca-6,8-dienedioylcarnitine 425.2704 11.437e-21
P49932 No candidate annotation 635.4266 18.835e-11
P49933 Senbusine A 423.2591 12.556e-11
P49960 Taxinine M 686.2563 12.05e-13
P49964 Lupeol beta-phenyl propionate 558.4444 12.567e-12
P49988 Rifamycin W-hemiacetal 653.2891 14.759e-12
P50011 1-(9Z-tetradecenoyl)-2-tridecanoyl-glycero-3-phosphoethanolamine 619.4247 19.438e-12
P50021 24-Nor-5beta-cholane-3alpha,7alpha,12alpha,23-tetrol 380.2856 14.409e-15
P50035 16alpha, 17-epoxy gibberellin A9 332.1655 16.393e-15