SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 287 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P41909 No candidate annotation 97.5037 12.55e-13
P41912 Ixerin N 538.2386 11.273e-11
P41917 TMC 2A 570.2358 18.253e-12
P41919 Alpha-Hydroxy-tamoxifen-O-glucuronide 563.2547 17.514e-13
P41927 6beta-(2'-Methylbutanoyloxy)-10beta-hydroxy-8alpha-methoxyeremophil-7(11)-en-12,8beta-olide 380.2187 12.825e-16
P41949 Caledonixanthone B 278.0949 18.441e-12
P41950 5,6-Epoxyoctadeca-7,9-diynoic acid 290.1854 11.644e-11
P41966 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid 555.2374 11.04e-14
P41970 N-Methylheteropsine 554.2240 12.129e-15
P41977 No candidate annotation 738.9408 14.93e-11