P41966
Metabolite ID
P41966
Deionized mass
555.2374 Da
Average m/z
556.2452
Average RT
21.0715
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
68
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
68 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.01G045600 | hypothetical protein | NA | 3 | Chr01:5242432–5245038 (-) | 1.525e-15 | |
| Glyma.06G305700 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 3 | Chr06:49451501–49461369 (-) | 7.991e-13 | |
| Glyma.18G242900 | hypothetical protein | NA | 3 | Chr18:53113341–53119592 (-) | 4.204e-14 | |
| Glyma.03G021600 | hypothetical protein | AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … | 2 | Chr03:2240686–2246512 (-) | 9.794e-12 | |
| Glyma.05G164700 | hypothetical protein | NA | 2 | Chr05:35543931–35549196 (-) | 6.595e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 2 | Chr12:36267599–36271584 (+) | 2.297e-15 | |
| Glyma.01G045400 | hypothetical protein | NA | 1 | Chr01:5140834–5144197 (-) | 2.496e-14 | |
| Glyma.01G045700 | hypothetical protein | AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… | 1 | Chr01:5265956–5271379 (-) | 1.525e-15 | |
| Glyma.01G175500 | hypothetical protein | AT3G50660:DWF4:Cytochrome P450 superfamily protein | 1 | Chr01:51219681–51224948 (+) | 5.926e-14 | |
| Glyma.01G234100 | hypothetical protein | AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr01:56022128–56026001 (+) | 6.01e-11 | |
| Glyma.02G044600 | hypothetical protein | NA | 1 | Chr02:4131829–4134877 (+) | 1.642e-12 | |
| Glyma.02G086900 | hypothetical protein | AT3G24130:AT3G24130:Pectin lyase-like superfamily protein | 1 | Chr02:7553127–7557516 (-) | 2.661e-11 | |
| Glyma.02G295900 | hypothetical protein | NA | 1 | Chr02:47375932–47378006 (+) | 3.909e-11 | |
| Glyma.02G296200 | hypothetical protein | AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 | 1 | Chr02:47383044–47395946 (-) | 3.909e-11 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 3.835e-13 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 8.739e-13 | |
| Glyma.03G022300 | hypothetical protein | AT3G60880:DHDPS1:dihydrodipicolinate synthase 1 | 1 | Chr03:2331191–2334210 (-) | 7.542e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 1.641e-16 | |
| Glyma.03G040600 | hypothetical protein | AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 | 1 | Chr03:5113019–5121557 (+) | 5.375e-12 | |
| Glyma.03G135600 | hypothetical protein | NA | 1 | Chr03:35109981–35110632 (-) | 5.33e-11 | |
| Glyma.03G136000 | hypothetical protein | NA | 1 | Chr03:35138670–35188160 (-) | 2.625e-11 | |
| Glyma.03G177700 | hypothetical protein | NA | 1 | Chr03:39046772–39051158 (+) | 6.973e-11 | |
| Glyma.05G034000 | hypothetical protein | AT4G03400:DFL2:Auxin-responsive GH3 family protein | 1 | Chr05:2965889–2971412 (-) | 7.971e-12 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 1.137e-11 | |
| Glyma.05G126400 | hypothetical protein | NA | 1 | Chr05:31961493–31968339 (+) | 4.77e-12 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 6.065e-13 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 1.995e-12 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 1.995e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 1.04e-14 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 1.991e-13 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 1.991e-13 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 1.991e-13 | |
| Glyma.05G137500 | hypothetical protein | NA | 1 | Chr05:33012282–33015297 (-) | 7.129e-11 | |
| Glyma.06G118500 | hypothetical protein | NA | 1 | Chr06:9644661–9650144 (-) | 3.07e-15 | |
| Glyma.06G118800 | hypothetical protein | NA | 1 | Chr06:9666921–9667708 (+) | 3.07e-15 | |
| Glyma.06G121000 | hypothetical protein | NA | 1 | Chr06:9848464–9850191 (-) | 1.552e-14 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 1.552e-11 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 1.552e-11 | |
| Glyma.06G190300 | hypothetical protein | AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) | 1 | Chr06:16709212–16710732 (-) | 4.903e-12 | |
| Glyma.06G305100 | hypothetical protein | NA | 1 | Chr06:49413291–49417661 (-) | 2.812e-11 | |
| Glyma.06G305300 | hypothetical protein | NA | 1 | Chr06:49431590–49435985 (-) | 7.991e-13 | |
| Glyma.06G305600 | hypothetical protein | NA | 1 | Chr06:49446542–49450635 (-) | 7.991e-13 | |
| Glyma.07G091400 | COL21 | CONSTANS-like zinc finger protein | AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein | 1 | Chr07:8539101–8547001 (+) | 1.409e-13 |
| Glyma.07G095400 | hypothetical protein | NA | 1 | Chr07:8914725–8920132 (+) | 1.641e-11 | |
| Glyma.09G058900 | hypothetical protein | NA | 1 | Chr09:5397968–5404650 (-) | 7.487e-12 | |
| Glyma.09G202900 | hypothetical protein | AT5G10560:AT5G10560:Glycosyl hydrolase family protein | 1 | Chr09:42685911–42690981 (-) | 3.705e-13 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 1.984e-12 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 1.14e-13 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 1.14e-13 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 1.14e-13 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 1.14e-13 | |
| Glyma.11G058400 | hypothetical protein | NA | 1 | Chr11:4409851–4413688 (+) | 5.404e-11 | |
| Glyma.11G119600 | hypothetical protein | AT2G16130:PMT2:polyol/monosaccharide transporter 2 | 1 | Chr11:9127497–9129972 (-) | 9.54e-11 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 1.306e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 1.306e-11 | |
| Glyma.12G186200 | hypothetical protein | AT3G44350:NAC061:NAC domain containing protein 61 | 1 | Chr12:34708678–34710549 (+) | 3.952e-11 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 2.297e-15 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 4.584e-11 | |
| Glyma.13G161900 | PAP25 | purple acid phosphatase | AT5G34850:PAP26:purple acid phosphatase 26 | 1 | Chr13:27748190–27752685 (-) | 1.072e-13 |
| Glyma.13G319700 | hypothetical protein | NA | 1 | Chr13:41414504–41418957 (+) | 2.01e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 1 | Chr14:8654730–8655892 (-) | 9.86e-12 | |
| Glyma.14G094200 | hypothetical protein | AT5G11840:AT5G11840:YCF36, putative (DUF1230) | 1 | Chr14:8770378–8774149 (-) | 2.789e-11 | |
| Glyma.14G094300 | hypothetical protein | NA | 1 | Chr14:8771316–8772515 (+) | 2.789e-11 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 5.506e-14 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 3.271e-12 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… | 1 | Chr18:53855786–53862322 (-) | 4.278e-13 | |
| Glyma.18G268000 | hypothetical protein | NA | 1 | Chr18:55205656–55213313 (-) | 9.16e-12 | |
| Glyma.19G218100 | hypothetical protein | AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 | 1 | Chr19:47082133–47085750 (+) | 3.875e-12 |