SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 189 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P27478 N-Acetyl-serylaspartic acid 262.0811 11.732e-12
P27511 No candidate annotation 593.2758 16.334e-17
P27517 No candidate annotation 363.3063 18.363e-15
P27519 rhamnetin 3-rhamninoside 296.0882 11.957e-11
P27525 Burkinabin B 492.1288 12.497e-13
P27540 Delavaconine 393.2469 15.509e-12
P27570 Cochinchinenin 514.1991 11.131e-11
P27573 Obscurolide A3 277.1302 11.146e-11
P27574 TG(15:0/O-18:0/20:5(5Z,8Z,11Z,14Z,17Z)) 852.7692 11.798e-13
P27584 Funingenoside A 898.4320 11.114e-14