Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P27573

Metabolite ID
P27573
Deionized mass
277.1302 Da
Average m/z
278.1369
Average RT
15.2545
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)3.393e-12
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 2Chr02:693193–700260 (+)4.094e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)7.65e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)7.551e-11
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)4.841e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.456e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.456e-12
Glyma.02G062600 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr02:5645621–5648965 (+)9.721e-11
Glyma.02G126400 hypothetical protein NA 1Chr02:12678071–12683492 (+)7.525e-11
Glyma.02G129200 hypothetical protein AT1G26160:AT1G26160:Metal-dependent phosphohydrolase 1Chr02:13217893–13226292 (+)6.029e-11
Glyma.02G130200 hypothetical protein AT1G68740:PHO1;H1:EXS (ERD1/XPR1/SYG1) family protein 1Chr02:13340016–13346701 (-)6.029e-11
Glyma.02G130700 hypothetical protein AT1G68750:PPC4:phosphoenolpyruvate carboxylase 4 1Chr02:13470428–13489647 (-)6.029e-11
Glyma.02G131600 hypothetical protein AT4G34020:DJ1C:Class I glutamine amidotransferase-like superfamily protein 1Chr02:13577916–13581914 (+)6.029e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)8.154e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.277e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.146e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.017e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.017e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.017e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)5.721e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.932e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.129e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.128e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.725e-15
Glyma.06G289400 hypothetical protein AT2G20580:RPN1A:26S proteasome regulatory subunit S2 1A__AT4G28470:RPN1B:26S proteasome regulatory subunit S2 1B 1Chr06:47813934–47821512 (+)9.399e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)7.65e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)7.65e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)7.65e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)7.65e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.007e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.007e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.815e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.815e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.774e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.774e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)7.27e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)8.363e-12
Glyma.16G120200 hypothetical protein AT4G35730:AT4G35730:Regulator of Vps4 activity in the MVB pathway protein 1Chr16:26823772–26828068 (+)1.938e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.317e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)3.475e-11
Glyma.18G262800 hypothetical protein NA 1Chr18:54832649–54833890 (+)9.5e-11
Glyma.18G301600 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 1Chr18:57939468–57945328 (+)1.381e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)2.55e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.058e-11