SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 18 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P03792 Meridianin A 226.0868 11.298e-12
P03801 Lapathoside D 634.1878 13.141e-12
P03812 Safflomin C 614.1655 14.095e-11
P03825 1,2-(dioctanoyl)-sn-glycero-3-phospho-(1'- myo-inositol-4',5'-bisphosphate) 746.2092 12.129e-15
P03841 (R)-8-Methylsulfinyloctyl isothiocyanate 233.0895 11.284e-12
P03852 1-O-Galloylglycerol 244.0557 11.017e-12
P03886 Methyl 2,3-dihydro-3,5-dihydroxy-2-oxo-3-indoleacetic acid 237.0625 11.195e-11
P03901 Bolton-Hunter reagent 263.0762 17.37e-11
P03908 No candidate annotation 438.5879 13.997e-17
P03942 1-Phenyl-1-cyclohexene 158.1076 19.121e-14