SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G124700

Description hypothetical protein

Gene interval Chr05:31807311–31817648 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2364Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0013.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2364 matching features · page 196 of 237

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P42908 No candidate annotation 1047.0463 14.104e-12
P42913 Abutiloside D 1036.5457 11.822e-12
P42924 TG(22:0/20:0/a-25:0)[rac] 1073.0188 14.16e-11
P42930 No candidate annotation 1945.0318 12.863e-11
P42934 Ranmogenin A 462.2976 17.283e-11
P42985 GalNAcalpha1-3(Fucalpha1-2)Galbeta1-3GalNAcalpha1-3(Fucalpha1-2)Galbeta1-4GlcNAcbeta1-3Galbeta1-4Glcbeta-Cer(d18:1/16:0) 2087.0744 12.059e-13
P43004 No candidate annotation 889.4915 12.51e-12
P43007 No candidate annotation 407.3600 11.067e-11
P43018 No candidate annotation 582.3881 14.314e-11
P43036 (2S)-2-Hexylsulfanyl-N-[6-methyl-2,4-bis(methylsulfanyl)pyridin-3-yl]decanamide 470.2434 14.614e-11