Overview Annotation GWAS Evidence Associated genes

P42985

Metabolite ID
P42985
Deionized mass
2087.0744 Da
Average m/z
1044.5526
Average RT
21.7562
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G025900 hypothetical protein NA 1Chr02:2323369–2327457 (+)1.932e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.059e-13
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)3.633e-11
Glyma.10G234300 hypothetical protein NA 1Chr10:46335347–46337197 (-)9.115e-11
Glyma.10G237600 hypothetical protein NA 1Chr10:46607534–46609838 (+)9.116e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.466e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.466e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.466e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.135e-12