Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43036

Metabolite ID
P43036
Deionized mass
470.2434 Da
Average m/z
471.2491
Average RT
21.7824
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
94
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

94 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.923e-12
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)1.6e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)2.632e-14
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 2Chr02:693193–700260 (+)1.298e-12
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)1.597e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.346e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)2.698e-13
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)2.698e-13
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)2.698e-13
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)3.877e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)3.107e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.075e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)3.886e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)5.502e-12
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)5.444e-13
Glyma.01G174300 hypothetical protein NA 1Chr01:51115502–51120201 (+)7.436e-11
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 1Chr01:51138854–51141103 (+)7.436e-11
Glyma.01G176400 hypothetical protein AT1G63810:AT1G63810:nucleolar protein 1Chr01:51285599–51295173 (-)1.955e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)4.506e-12
Glyma.04G234900 hypothetical protein AT5G53000:TAP46:2A phosphatase associated protein of 46 kD 1Chr04:50332008–50336222 (-)4.299e-12
Glyma.04G235400 hypothetical protein AT3G49260:iqd21:IQ-domain 21 1Chr04:50351726–50356449 (-)9.242e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.614e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.339e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)2.427e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.427e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.71e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.492e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.492e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.492e-12
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)5.994e-11
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)2.325e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.34e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.612e-12
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)4.478e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)3.98e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.923e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.923e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)8.998e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)1.597e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)1.413e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)5.346e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)5.346e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.346e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.346e-12
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)4.687e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.065e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)2.841e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)1.868e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.691e-13
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)2.439e-13
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)2.698e-13
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)2.698e-13
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)2.698e-13
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)2.698e-13
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)2.698e-13
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)1.176e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.282e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.481e-12
Glyma.10G172600 hypothetical protein AT5G41900:AT5G41900:alpha/beta-Hydrolases superfamily protein__AT1G64670:BDG1:alpha/beta-Hydrolases superfamily protein 1Chr10:40628401–40633140 (-)8.285e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)7.226e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.402e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)7.937e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)7.937e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)7.937e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)7.937e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)2.635e-13
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.162e-12
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)7.898e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)7.898e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)7.898e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.467e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)3.124e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.087e-14
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)4.481e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)7.556e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.483e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)3.398e-12
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)5.571e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)4.428e-12
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)2.533e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.515e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.515e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)8.162e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)6.559e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)8.524e-11
Glyma.20G099200 hypothetical protein AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 co… 1Chr20:34242852–34248956 (-)1.514e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)2.674e-11
Glyma.20G107900 hypothetical protein NA 1Chr20:35044042–35046452 (-)8.104e-12
Glyma.20G108000 hypothetical protein NA 1Chr20:35047833–35051623 (-)5.196e-12
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)1.001e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)9.336e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)4.101e-16
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)1.425e-13
Glyma.20G112600 hypothetical protein AT5G04310:AT5G04310:Pectin lyase-like superfamily protein 1Chr20:35468911–35474203 (+)1.9e-11