SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G124700

Description hypothetical protein

Gene interval Chr05:31807311–31817648 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features2364Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0013.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2364 matching features · page 180 of 237

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39537 5-Megastigmen-7-yne-3,9-diol 9-glucoside 370.1958 13.062e-12
P39678 PGP(20:4(5Z,8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)) 898.4839 16.047e-12
P39682 Veralosine 617.3962 14.572e-11
P39690 No candidate annotation 570.7453 11.077e-12
P39693 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid 555.2408 13.71e-11
P39708 Methyl N-({(2s,3s)-3-[(Propylamino)carbonyl]oxiran-2-Yl}carbonyl)-L-Isoleucyl-L-Prolinate 397.2207 15.881e-11
P39715 Soyasaponin aa 1054.5351 11.285e-11
P39722 Pellynol H 510.3657 19.698e-15
P39788 No candidate annotation 883.4670 18.096e-11
P39845 Celogentin C 1026.5333 19.902e-11