SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G116900

Description hypothetical protein

Gene interval Chr04:13696275–13700803 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features754Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

754 matching features · page 62 of 76

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P41710 D-Phe-L-Pro-L-Arg-(Chloromethyl) ketone 478.2099 14.177e-11
P41862 m-Trigallic acid 474.0438 18.895e-12
P41895 PA(20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)/2:0) 546.2227 16.589e-11
P41898 No candidate annotation 546.7256 13.382e-11
P41899 Cycloshizukaol A 548.2461 16.715e-11
P41909 No candidate annotation 97.5037 14.106e-11
P41917 TMC 2A 570.2358 12.354e-12
P41952 No candidate annotation 705.3410 14.452e-11
P41954 No candidate annotation 818.9787 18.268e-11
P41970 N-Methylheteropsine 554.2240 18.8e-12