SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G145700

Description hypothetical protein

Gene interval Chr03:36109689–36112241 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G58030:AT3G58030:RING/U-box superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features132Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

132 matching features · page 6 of 14

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P23227 Carbocysteine-lysine 307.1150 16.869e-11
P23494 Microcin SF608 608.3315 14.704e-11
P23757 Threonylglutamic acid 248.1005 16.449e-11
P23823 Tubastrindole G 509.2142 12.928e-11
P24129 trans-[6]-Shogaol 180.0774 13.404e-11
P24264 methyl 5S,6R,7R-triacetoxy-9-oxo-10-chloro-12S-hydroxy-10Z,14Z,17Z-prostatrienoate-cyclo[8R,12S] 556.2047 11.564e-11
P24533 Indoleacetyl glutamine 303.1219 16.147e-11
P24832 Stercobilin 594.3421 11.379e-11
P24945 (S)-3-(8-(Dimethylaminomethyl)-6,7,8,9-tetrahydropyrido(1,2-a)indol-10-yl)-4-(1-methyl-3-indolyl)-1H-pyrrole-2,5-dione hydrochloride 452.2226 19.814e-11
P25124 No candidate annotation 223.0896 17.796e-12