Overview Annotation GWAS Evidence Associated genes

P24945

Metabolite ID
P24945
Deionized mass
452.2226 Da
Average m/z
453.2275
Average RT
14.5668
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)3.934e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.295e-11
Glyma.03G145700 hypothetical protein AT3G58030:AT3G58030:RING/U-box superfamily protein 1Chr03:36109689–36112241 (+)9.814e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)8.155e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.307e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)6.803e-12
Glyma.12G095500 hypothetical protein AT3G44150:AT3G44150:Expp1 protein 1Chr12:8023570–8027770 (-)6.799e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.231e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)5.411e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.724e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.724e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.724e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.871e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.293e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)6.387e-12
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)3.19e-11
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)3.19e-11
Glyma.16G147900 hypothetical protein NA 1Chr16:30864919–30872425 (+)2.574e-11