SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G039900

Description hypothetical protein

Gene interval Chr03:4988423–4991582 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features61Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0164.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

61 matching features · page 2 of 7

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11240 6-Benzylaminopurine 225.1038 18.783e-12
P11732 Chlovalicin 332.1401 11.22e-11
P12754 p-Formylbenzoic acid 150.0318 18.103e-11
P13499 2-Aminoindan 133.0884 19.83e-15
P14373 Syncarpamide 457.1946 14.678e-11
P14739 Lacto-N-triose I 545.1963 11.917e-12
P16784 N-{4-[(3,5-Difluorophenyl)sulfonyl]benzyl}imidazo[1,2-A]pyridine-6-Carboxamide 427.0800 15.534e-11
P17609 N,N-Didesmethyltramadol 235.1563 12.739e-11
P17621 o-Benzoquinone 108.0194 11.332e-11
P18019 AH 135Y 291.1104 11.728e-11