SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G019700

Description hypothetical protein

Gene interval Chr03:2010835–2018418 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G61130:GAUT1:galacturonosyltransferase 1

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features340Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

340 matching features · page 34 of 34

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P53116 No candidate annotation 243.8782 11.953e-14
P53176 No candidate annotation 258.8967 15.377e-11
P53233 13alpha-(Isovaleroyloxy)-lupanine 348.2424 16.043e-12
P53480 Bengamide F 372.2267 18.371e-12
P53742 Cadensin G 468.0981 15.178e-11
P54222 No candidate annotation 671.1509 18.869e-13
P54280 Brachycerine 546.2208 17.289e-16
P54549 Akuammine 382.1900 17.295e-12
P54771 Inhibitor 50 435.0802 11.637e-11
P55415 No candidate annotation 421.3709 15.971e-11