SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G016700

Description hypothetical protein

Gene interval Chr03:1683395–1688893 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features461Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records17

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0369.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

461 matching features · page 32 of 47

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P34226 Morniflumate 395.1428 14.441e-11
P34351 Arginylglutamine 302.1710 16.394e-13
P34357 1-Acetyl-3-carboxy-tetrahydro-beta-carboline 258.0998 11.394e-12
P34391 No candidate annotation 928.3328 15.959e-11
P34700 Phaseoloidin 330.0963 15.772e-11
P34869 Triptregeline J 657.2688 11.227e-11
P34893 Glomosporin 973.4902 12.121e-11
P34921 Xyloccensin O 700.2387 11.704e-11
P35037 2-Hydroxy-4-methoxybenzophenone 228.0774 17.079e-11
P35175 Sublanceoside H6 938.4807 19.187e-11