Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34700

Metabolite ID
P34700
Deionized mass
330.0963 Da
Average m/z
331.1019
Average RT
17.4981
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
94
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

94 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 4Chr16:26324650–26336836 (+)1.031e-17
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)7.428e-12
Glyma.15G019600 hypothetical protein AT5G48120:MET18:ARM repeat superfamily protein 3Chr15:1524472–1536978 (-)6.508e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.031e-17
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)2.025e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)3.314e-14
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)4.702e-11
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)8.873e-14
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)4.661e-14
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)3.944e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)7.428e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.931e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.931e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.463e-11
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)6.436e-11
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)6.436e-11
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)6.436e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)5.772e-11
Glyma.03G017800 hypothetical protein AT4G00770:TRM9:DUF4378 domain protein 1Chr03:1780719–1783735 (+)1.044e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.24e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.469e-14
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)7.931e-13
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)3.517e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.176e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.819e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.819e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.819e-11
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)1.915e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)6.028e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.082e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.208e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.785e-19
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.165e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.787e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.787e-14
Glyma.06G289300 hypothetical protein AT2G20570:GPRI1:GBF's pro-rich region-interacting factor 1 1Chr06:47797509–47802933 (+)2.507e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)7.847e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.471e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)7.847e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)7.846e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.471e-12
Glyma.06G313600 hypothetical protein AT5G13750:ZIFL1:zinc induced facilitator-like 1 1Chr06:50219160–50226659 (-)1.41e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.412e-13
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)1.506e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.319e-13
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)2.319e-13
Glyma.08G136700 hypothetical protein NA 1Chr08:10457207–10460163 (-)4.477e-12
Glyma.09G210800 hypothetical protein AT1G32050:SCAMP5:SCAMP family protein 1Chr09:43476243–43482337 (+)1.581e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)2.809e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)6.395e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)7.643e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)7.643e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)7.643e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)7.643e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.657e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.657e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.829e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.829e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)2.512e-12
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 1Chr12:36371465–36377700 (-)1.146e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.825e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.314e-14
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)2.466e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.702e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)2.341e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.962e-11
Glyma.15G020300 hypothetical protein AT1G51950:IAA18:indole-3-acetic acid inducible 18__AT3G16500:PAP1:phytochrome-associated protein 1 1Chr15:1573643–1577917 (+)9.022e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.43e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)4.33e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)4.33e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)4.33e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)4.33e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)7.684e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.968e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.031e-17
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.031e-17
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)9.437e-17
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.461e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)9.17e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)4.71e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)7.809e-12
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)2.97e-11
Glyma.17G215400 hypothetical protein NA 1Chr17:36163614–36164915 (+)8.46e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)4.995e-11
Glyma.18G049500 hypothetical protein NA 1Chr18:4251051–4254880 (-)3.828e-11
Glyma.18G049600 hypothetical protein AT5G58260:NdhN:oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 1Chr18:4258376–4260462 (-)3.828e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)3.39e-11
Glyma.18G299700 hypothetical protein AT2G43180:AT2G43180:Phosphoenolpyruvate carboxylase family protein 1Chr18:57755837–57757150 (-)8.968e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)7.419e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)1.044e-12
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)3.198e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)3.636e-14
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)5.126e-11
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)9.015e-11