Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34391

Metabolite ID
P34391
Deionized mass
928.3328 Da
Average m/z
929.3447
Average RT
17.3985
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.576e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)2.307e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)6.595e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.269e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.269e-15
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.931e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)2.643e-14
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)2.953e-11
Glyma.01G017900 hypothetical protein NA 1Chr01:1734474–1735545 (+)8.564e-11
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)1.522e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)7.525e-13
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)2.266e-13
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)1.103e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)5.959e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)1.244e-12
Glyma.03G019300 hypothetical protein NA 1Chr03:1952796–1975003 (+)2.547e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)8.122e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)1.079e-12
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.076e-13
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.746e-14
Glyma.03G022500 hypothetical protein NA 1Chr03:2339702–2345448 (+)3.909e-11
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)7.667e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.085e-13
Glyma.03G073300 hypothetical protein AT1G79210:AT1G79210:N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 1Chr03:17770362–17785644 (+)4.856e-12
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)4.806e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.173e-12
Glyma.07G078300 hypothetical protein NA 1Chr07:7150800–7154478 (-)3.679e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)3.005e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)1.122e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)3.826e-14
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.553e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)3.317e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)6.595e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.489e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.489e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.269e-15
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)5.636e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.169e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)4.889e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.701e-14
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.931e-12
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)2.104e-12
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)7.957e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)3.287e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.469e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)6.498e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.469e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.469e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.576e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.576e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.576e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.576e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.598e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.035e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.645e-13
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)7.319e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)5.882e-12
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)4.729e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)4.153e-11