Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34226

Metabolite ID
P34226
Deionized mass
395.1428 Da
Average m/z
396.1504
Average RT
17.3277
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
56
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

56 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 3Chr13:31727841–31735910 (-)1.749e-12
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)1.25e-13
Glyma.03G035500 hypothetical protein NA 2Chr03:4289118–4294184 (+)3.213e-11
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 2Chr03:4472672–4477787 (-)1.309e-11
Glyma.05G191200 hypothetical protein AT5G64070:PI-4KBETA1:phosphatidylinositol 4-OH kinase beta1 2Chr05:37681814–37696898 (+)1.567e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.982e-11
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)4.441e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)2.399e-13
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1Chr03:3567906–3572939 (-)2.363e-11
Glyma.03G034200 hypothetical protein NA 1Chr03:3989072–3993561 (+)5.793e-13
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)1.474e-11
Glyma.03G036500 WNK5 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr03:4402746–4408323 (+)1.992e-12
Glyma.03G036600 hypothetical protein NA 1Chr03:4432910–4435002 (-)9.895e-13
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)6.307e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)6.407e-13
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)7.328e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.268e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.976e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.976e-11
Glyma.05G191100 hypothetical protein NA 1Chr05:37676422–37680204 (+)1.567e-11
Glyma.05G191400 hypothetical protein AT2G13690:AT2G13690:PRLI-interacting factor 1Chr05:37703526–37706642 (-)1.567e-11
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 1Chr05:37711639–37726572 (-)2.18e-14
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)1.178e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)5.181e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.135e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.313e-12
Glyma.06G289600 hypothetical protein AT5G51740:AT5G51740:Peptidase family M48 family protein 1Chr06:47831855–47835534 (-)3.544e-11
Glyma.06G289900 hypothetical protein AT2G20590:AT2G20590:Reticulon family protein 1Chr06:47861573–47865518 (-)4.508e-12
Glyma.06G291300 hypothetical protein NA 1Chr06:48016841–48019943 (+)2.206e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)6.866e-15
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)5.71e-15
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)6.866e-15
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)6.866e-15
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)5.71e-15
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)4.783e-12
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)4.051e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)9.524e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)9.717e-12
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)9.717e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.317e-12
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)4.527e-12
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)4.193e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)9.274e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)9.274e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)9.274e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)9.274e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)7.862e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)2.112e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.982e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)1.749e-12
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)6.061e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)1.749e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.537e-12
Glyma.15G049000 hypothetical protein NA 1Chr15:3866108–3867740 (+)1.319e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.182e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.064e-11