SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G304000

Description hypothetical protein

Gene interval Chr02:47908136–47915999 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G51350:AT1G51350:ARM repeat superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features264Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0152.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

264 matching features · page 7 of 27

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P12353 Methdilazine 296.1377 14.434e-13
P12357 N1,N5,N10-Tricoumaroyl spermidine 583.2709 18.094e-11
P12494 Oclacitinib 337.1591 11.877e-11
P12516 Gallic acid 170.0196 14.331e-11
P13231 Atromentin 324.0635 12.79e-12
P13309 4-Phenethylphenol 198.1061 12.431e-11
P13341 3-(6-Methylpyridin-2-yl)-N-phenyl-4-(quinolin-4-yl)-1H-pyrazole-1-carbothioamide 421.1324 12.605e-14
P13362 Quercetin 3-coumaroyl-triglucoside 488.1517 13.142e-13
P13723 N-(3S-hydroxydecanoyl)-L-serine 275.1703 13.132e-11
P13827 (3-Nitrobenzoyl)alanine 238.0564 11.56e-11